trackSet-methods {rtracklayer}R Documentation

Get a trackSet

Description

Methods for getting a trackSet.

Usage

trackSet(object, segment = genomeSegment(), ...)

Arguments

object An object from which to obtain a trackSet.
segment The segment from which to obtain the features.
... Arguments passed on to methods.

Methods

The following methods are defined by rtracklayer.

object = "ucscSession"
trackSet(object, segment = genomeSegment(object), name, format = "bed", table = NULL): Get a track from the session by its name in format format. Some built-in tracks have multiple series, each identified by a table name.
object = "argoSession"
trackSet(object, segment = genomeSegment(object), name): Get a track from the session by its name.

See Also

layTrack for loading a trackSet into a session.

Examples

## Not run: 
session <- browseGenome()
track <- import(system.file("tests", "v2.gff", package = "rtracklayer"))
layTrack(session, track, "My Track")
track <- trackSet(session, name = "My Track")
## End(Not run)

[Package rtracklayer version 1.0.0 Index]