Package: ReactomePA
Type: Package
Title: Reactome Pathway Analysis
Version: 1.54.0
Authors@R: c(person(given = "Guangchuang", family = "Yu",
	   	    email = "guangchuangyu@gmail.com",
		    role  = c("aut", "cre")),
	     person(given = "Vladislav", family = "Petyuk",
	     	    email = "petyuk@gmail.com",
		    role  = "ctb"))
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Description: This package provides functions for pathway analysis based
        on REACTOME pathway database. It implements enrichment
        analysis, gene set enrichment analysis and several functions
        for visualization. This package is not affiliated with the
        Reactome team.
Depends: R (>= 3.4.0)
Imports: AnnotationDbi, DOSE (>= 3.5.1), enrichplot, ggplot2 (>=
        3.3.5), ggraph, reactome.db, igraph, graphite, gson,
        yulab.utils (>= 0.1.5)
Suggests: BiocStyle, clusterProfiler, knitr, rmarkdown, org.Hs.eg.db,
        prettydoc, testthat
VignetteBuilder: knitr
ByteCompile: true
License: GPL-2
URL: https://yulab-smu.top/contribution-knowledge-mining/
BugReports: https://github.com/GuangchuangYu/ReactomePA/issues
Packaged: 2025-11-11 16:56:40 UTC; root
biocViews: Pathways, Visualization, Annotation, MultipleComparison,
        GeneSetEnrichment, Reactome
RoxygenNote: 7.3.2
Encoding: UTF-8
Config/pak/sysreqs: libcairo2-dev libfontconfig1-dev libfreetype6-dev
        libglpk-dev make libicu-dev libpng-dev libxml2-dev libssl-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:10:37 UTC
RemoteUrl: https://github.com/bioc/ReactomePA
RemoteRef: RELEASE_3_22
RemoteSha: 36f3c2fd28ea5b09036e2e74aa28393faf97abf9
NeedsCompilation: no
Author: Guangchuang Yu [aut, cre],
  Vladislav Petyuk [ctb]
Built: R 4.5.2; ; 2025-11-11 17:02:43 UTC; windows
