An R interface to the Ontology Lookup Service

---

Documentation for package ‘rols’ version 3.5.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

A C D I L O P R S T U misc

-- A --

allRows	Querying OLS
ancestors	Ontology Terms
as.character.CVParam	Controlled Vocabulary
as.data.frame.OlsSearch	Querying OLS
as.data.frame.Ontologies	Ontologies
as.Term.data.frame	Ontology Terms
as.Terms.data.frame	Ontology Terms

-- C --

charIsCVParam	Controlled Vocabulary
children	Ontology Terms
cvCharToCVPar	Controlled Vocabulary
CVParam	Controlled Vocabulary

-- D --

descendants

Ontology Terms

-- I --

isObsolete	Ontology Terms
isObsolete,Term	Ontology Terms
isObsolete,Terms	Ontology Terms
isObsolete-method	Ontology Terms
isRoot	Ontology Terms
isRoot,Term	Ontology Terms
isRoot,Terms	Ontology Terms
isRoot-method	Ontology Terms

-- L --

lapply-method	Ontologies
lapply-method	Ontology Terms
length-method	Ontologies
length-method	Term Properties
length-method	Ontology Terms

-- O --

olsConfig	Ontologies
olsConfig,Ontology	Ontologies
olsConfig-method	Ontologies
olsDesc	Ontologies
olsDesc,character	Ontologies
olsDesc,Ontologies	Ontologies
olsDesc,Ontology	Ontologies
olsDesc-method	Ontologies
olsLinks	Ontologies
olsLinks,Ontology	Ontologies
olsLinks-method	Ontologies
olsLoaded	Ontologies
olsLoaded,character	Ontologies
olsLoaded,Ontologies	Ontologies
olsLoaded,Ontology	Ontologies
olsLoaded-method	Ontologies
olsNamespace	Ontologies
olsNamespace,character	Ontologies
olsNamespace,Ontologies	Ontologies
olsNamespace,Ontology	Ontologies
olsNamespace-method	Ontologies
olsPrefix	Ontologies
olsPrefix,character	Ontologies
olsPrefix,Ontologies	Ontologies
olsPrefix,Ontology	Ontologies
olsPrefix-method	Ontologies
olsRows	Querying OLS
olsRows<-	Querying OLS
OlsSearch	Querying OLS
olsSearch	Querying OLS
olsStatus	Ontologies
olsStatus,character	Ontologies
olsStatus,Ontologies	Ontologies
olsStatus,Ontology	Ontologies
olsStatus-method	Ontologies
olsTitle	Ontologies
olsTitle,character	Ontologies
olsTitle,Ontologies	Ontologies
olsTitle,Ontology	Ontologies
olsTitle-method	Ontologies
olsUpdated	Ontologies
olsUpdated,character	Ontologies
olsUpdated,Ontologies	Ontologies
olsUpdated,Ontology	Ontologies
olsUpdated-method	Ontologies
olsVersion	Ontologies
olsVersion,character	Ontologies
olsVersion,Ontologies	Ontologies
olsVersion,Ontology	Ontologies
olsVersion-method	Ontologies
Ontologies	Ontologies
Ontologies-method	Ontologies
Ontology	Ontologies
Ontology-method	Ontologies
ontologyUrl	Ontologies
ontologyUrl,character	Ontologies
ontologyUrl,Ontology	Ontologies
ontologyUrl-method	Ontologies

-- P --

parents	Ontology Terms
Properties	Term Properties
Properties,character	Term Properties
Properties,length	Term Properties
Properties,Ontology	Term Properties
Properties,Term	Term Properties
Properties,Terms	Term Properties
Properties-method	Term Properties
Property	Term Properties

-- R --

rep-method

Controlled Vocabulary

-- S --

show-method	Controlled Vocabulary
show-method	Querying OLS
show-method	Ontologies
show-method	Term Properties
show-method	Ontology Terms

-- T --

Term	Ontology Terms
Term-method	Ontology Terms
termDesc	Ontology Terms
termDesc,Term	Ontology Terms
termDesc,Terms	Ontology Terms
termDesc-method	Ontology Terms
termId	Ontology Terms
termId,Term	Ontology Terms
termId,Terms	Ontology Terms
termId-method	Ontology Terms
termLabel	Ontology Terms
termLabel,Term	Ontology Terms
termLabel,Terms	Ontology Terms
termLabel-method	Ontology Terms
termLinks	Ontology Terms
termLinks,Term	Ontology Terms
termLinks-method	Ontology Terms
termNamespace	Ontology Terms
termNamespace,Term	Ontology Terms
termNamespace,Terms	Ontology Terms
termNamespace-method	Ontology Terms
termOntology	Ontology Terms
termOntology,Term	Ontology Terms
termOntology,Terms	Ontology Terms
termOntology-method	Ontology Terms
termPrefix	Ontology Terms
termPrefix,Term	Ontology Terms
termPrefix,Terms	Ontology Terms
termPrefix-method	Ontology Terms
Terms	Ontology Terms
Terms,character	Ontology Terms
Terms,Ontology	Ontology Terms
Terms-method	Ontology Terms
termSynonym	Ontology Terms
termSynonym,Term	Ontology Terms
termSynonym,Terms	Ontology Terms
termSynonym-method	Ontology Terms

-- U --

unique-method

Ontology Terms

-- misc --

'olsRows<-'	Querying OLS
.OlsSearch	Querying OLS
[-method	Ontologies
[-method	Ontology Terms
[[-method	Ontologies
[[-method	Ontology Terms