
## plyxp 1.1.1

* added `plyxp_on()` as a way to have further interior mutability on the 
  SummarizedExperiment class.

## plyxp 1.0.0

* BioConductor 3.20 release

## plyxp 0.99.24

* Since `plyxp` does not have a conflict with `tidySummarizedExperiment` anymore,
  we have removed package startup messages warning of potential conflicts.

## plyxp 0.99.21

* Fixed documentation of `?plyxp::mutate` and other dplyr functions reexported
  by `plyxp`.
* `PlySummarizedExperiment` should be able to hold any `SummarizedExperiment`
  object

## plyxp 0.99.20

* plyxp now wraps `SummarizedExperiment` in a shell class named
  `PlySummarizedExperiment` to avoid conflicts with `tidySummarizedExperiment`.
  * Use `PlySummarizedExperiment()` or `new_plyxp()` to create a new object.
  * Use standard Generics `se()` and `se<-()` to get and set the underlying
    `SummarizedExperiment` object.
  * plyxp `dplyr` verbs are now defined for `PlySummarizedExperiment` objects
    instead of `SummarizedExperiment` objects.
  * `PlySummarizedExperiment` uses enhanced printing methods to display
    `SummarizedExperiment` objects in a tidy format.

## plyxp 0.99.19

* Package renamed to `plyxp` to be more specific about its functionality

## plyxp 0.99.18

* messages checking for conflicts use `cli::` methods for pretty printing
* Vignette typo correction

## plyxp 0.99.13

* `print.SummarizedExperiment` has been renamed to
  `show_tidy.SummarizedExperiment` and `show_tidy` is exported as an S3 generic.
* Adjust show function display original show method by default. using
  `show_tidy()` is now opt-in via options or `use_show_tidy()`.
* Verbose messages checking if `tidySummarizedExperiment` is already attached or
  ever becomes loaded with `plyxp`.
* change README and Vignette explaining this package provides an alternative
  approach to `tidySummarizedExperiment` to manipulating `SummarizedExperiment`
  objects. For now they are exclusive in their functionality, but there may be
  plans to reconsile conflicts in the future!

## plyxp 0.99.12

* developer subscribed to bioc-devel mailing list
* used `<-` assignment instead of `=` in top-level functions

## plyxp 0.99.11

Biocondcutor Submission version!
