geomeTriD-package	geomeTriD-package
$,threeJsGeometry-method	threeJsGeometry-class
$<-,threeJsGeometry-method	threeJsGeometry-class
alignCoor	alignCoor
autoK	autoK
availableGeometries	availableGeometries
boundaryScore	spatialDistanceMatrix
boundaryScoreTAD	spatialDistanceMatrix
cellClusters	cellClusters
cellDistance	cellClusters
compartment	spatialDistanceMatrix
create3dGenomicSignals	create3dGenomicSignals
createTADGeometries	createTADGeometries
extractBackbonePositions	extractBackbonePositions
fill_NA	fill_NA
gaussianBlur	gaussianBlur
geomeTriD	geomeTriD-package
hierarchicalClusteringTAD	spatialDistanceMatrix
loopBouquetPlot	loopBouquetPlot
mdsPlot	mdsPlot
pointCluster	pointCluster
renderthreeJsViewer	threeJsViewer-shiny
rglViewer	rglViewer
SDC	SDC
show,threeJsGeometry-method	threeJsGeometry-class
smooth3dPoints	smooth3dPoints
spatialDistanceHeatmap	spatialDistanceMatrix
spatialDistanceMatrix	spatialDistanceMatrix
SRD	SRD
threeJsGeometry	threeJsGeometry-class
threeJsGeometry-class	threeJsGeometry-class
threejsOutput	threeJsViewer-shiny
threeJsViewer	threeJsViewer
threeJsViewer-shiny	threeJsViewer-shiny
view3dCells	view3dCells
view3dStructure	view3dStructure
