TrIdent - Transduction Identification
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Documentation for package ‘TrIdent’ version 1.1.4
Help Pages
| plotTrIdentResults | Plot read coverage graphs of contigs classified as Prophage-like, Sloping, or HighCovNoPattern |
| specializedTransductionID | Identify potential specialized transduction events on contigs classified as Prophage-like |
| TrIdentClassifier | Classify contigs as Prophage-like, Sloping, HighCovNoPattern, and NoPattern |