Functionality for Mass Spectrometry Features

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Documentation for package ‘MsFeatures’ version 1.17.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

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AbundanceSimilarityParam	Group features based on abundance similarities across samples
corRows	Correlate rows of a numeric matrix
featureGroups	Get or set feature group definitions from an object
featureGroups-method	Get or set feature group definitions from an object
featureGroups<-	Get or set feature group definitions from an object
featureGroups<--method	Get or set feature group definitions from an object
groupClosest	Group values with differences below threshold
groupConsecutive	Grouping of sorted values into sets with smallest differences
groupFeatures	General Feature Grouping Concept
groupFeatures-method	Group features based on abundance similarities across samples
groupFeatures-method	Group features based on approximate retention times
groupFeatures-similar-abundance	Group features based on abundance similarities across samples
groupFeatures-similar-rtime	Group features based on approximate retention times
groupSimilarityMatrix	Group rows of a diagonal matrix using a threshold
groupSimilarityMatrixTree	Identifies groups with intragroup pairwise distances less than maxDiff
se	Quantified LC-MS preprocessing result test data
SimilarRtimeParam	Group features based on approximate retention times