acc	performance-analytics
acc,table-method	performance-analytics
adaI	MLearn-new
baggingI	MLearn-new
balKfold.xvspec	balKfold.xvspec
BgbmI	MLearn-new
blackboostI	MLearn-new
brennan_2013_tabS7exc	brennan_2013_tabS7exc
classifierOutput-class	classifierOutput-class
classifOutput	MLIntInternals
clusteringOutput-class	clusteringOutput-class
clusteringSchema-class	clusteringOutput-class
clustOutput	MLIntInternals
confuMat	confuMat-methods
confuMat,classifierOutput,character-method	confuMat-methods
confuMat,classifierOutput,missing-method	confuMat-methods
confuMat,classifierOutput,numeric-method	confuMat-methods
confuMat,classifierOutput-method	confuMat-methods
confuMat-methods	confuMat-methods
confuTab	confuTab
cverrs	MLIntInternals
DAB	RAB
daboostCont-class	raboostCont-class
dlda	MLearn-new
dlda2	MLearn-new
dldaI	MLearn-new
es2df	MLIntInternals
F1	performance-analytics
F1,table-method	performance-analytics
fn	performance-analytics
fn,table-method	performance-analytics
fp	performance-analytics
fp,table-method	performance-analytics
fs.absT	fs.absT
fs.probT	fs.absT
fs.topVariance	fs.absT
fsHistory	fsHistory
fsHistory,classifierOutput-method	classifierOutput-class
gbm2	MLearn-new
getConverter	clusteringOutput-class
getConverter,clusteringSchema-method	clusteringOutput-class
getDist	clusteringOutput-class
getDist,clusteringSchema-method	clusteringOutput-class
getGrid	MLIntInternals
getGrid,data.frame-method	MLIntInternals
getGrid,ExpressionSet-method	MLIntInternals
getVarImp	varImpStruct-class
getVarImp,classifierOutput,logical-method	varImpStruct-class
getVarImp,classifierOutput,missing-method	varImpStruct-class
getVarImp,classifOutput,logical-method	varImpStruct-class
glmI.logistic	MLearn-new
groupIndex	MLIntInternals
hclustConverter	MLIntInternals
hclustI	MLearn-new
hclustWidget	hclustWidget
kmeansConverter	MLIntInternals
kmeansI	MLearn-new
knn.cv2	MLearn-new
knn.cvI	MLearn-new
knn2	MLearn-new
knnI	MLearn-new
ksvm2	MLearn-new
ksvmI	MLearn-new
ldaI	MLearn-new
ldaI.predParms	MLearn-new
learnerIn3D	projectedLearner-class
learnerIn3D,projectedLearner-method	projectedLearner-class
learnerSchema-class	learnerSchema-class
lvq	MLearn-new
lvqI	MLearn-new
macroF1	performance-analytics
macroF1,classifierOutput,character-method	performance-analytics
macroF1,classifierOutput,missing-method	performance-analytics
macroF1,classifierOutput,numeric-method	performance-analytics
macroF1,numeric,numeric-method	performance-analytics
macroF1,table,missing-method	performance-analytics
macroF1-methods	performance-analytics
makeClusteringSchema	MLIntInternals
makeConfuMat	MLIntInternals
makeLearnerSchema	MLearn-new
mapPSvec	MLIntInternals
membMat	MLIntInternals
mkfmla	RAB
MLearn	MLearn-new
MLearn,formula,data.frame,clusteringSchema,ANY-method	MLearn-new
MLearn,formula,data.frame,learnerSchema,numeric-method	MLearn-new
MLearn,formula,data.frame,learnerSchema,xvalSpec-method	MLearn-new
MLearn,formula,ExpressionSet,character,numeric-method	MLearn-new
MLearn,formula,ExpressionSet,learnerSchema,numeric-method	MLearn-new
MLearn,formula,ExpressionSet,learnerSchema,xvalSpec-method	MLearn-new
MLearn,formula,SummarizedExperiment,learnerSchema,numeric-method	MLearn-new
mlearnWidget	hclustWidget
MLearn_new	MLearn-new
MLIConverter.Bgbm	MLIntInternals
MLIConverter.blackboost	MLIntInternals
MLIConverter.dlda	MLIntInternals
MLIConverter.knn	MLIntInternals
MLIConverter.knncv	MLIntInternals
MLIConverter.ksvm	MLIntInternals
MLIConverter.ldaPredMeth	MLIntInternals
MLIConverter.logistic	MLIntInternals
MLIConverter.naiveBayes	MLIntInternals
MLIConverter.nnet	MLIntInternals
MLIConverter.plsda	MLIntInternals
MLIConverter.RAB	MLIntInternals
MLIConverter.randomForest	MLIntInternals
MLIConverter.rpart	MLIntInternals
MLIConverter.selftesting	MLIntInternals
MLIConverter.slda	MLIntInternals
MLIConverter.svm	MLIntInternals
MLIConverterListEl.class	MLIntInternals
MLIConverterPredType.class	MLIntInternals
MLIPredicter.knn	MLIntInternals
MLIPredicter.ksvm	MLIntInternals
MLIPredicter.naiveBayes	MLIntInternals
MLIPredicter.nnet	MLIntInternals
MLIPredicter.plsda	MLIntInternals
MLIPredicter.randomForest	MLIntInternals
MLIPredicter.svm	MLIntInternals
MLLabel	MLIntInternals
MLOutput	MLIntInternals
MLScore	MLIntInternals
naAs0	MLIntInternals
naiveBayesI	MLearn-new
nnetI	MLearn-new
nonstandardLearnerSchema-class	learnerSchema-class
pamConverter	MLIntInternals
pamI	MLearn-new
partPlot	MLIntInternals
planarPlot	planarPlot-methods
planarPlot,classifierOutput,data.frame,character-method	planarPlot-methods
planarPlot,classifierOutput,ExpressionSet,character-method	planarPlot-methods
planarPlot-methods	planarPlot-methods
planarPlot2	MLIntInternals
plot	varImpStruct-class
plot,clusteringOutput,ANY-method	clusteringOutput-class
plot,projectedLearner,ANY-method	projectedLearner-class
plot,varImpStruct,ANY-method	varImpStruct-class
plot,varImpStruct-method	varImpStruct-class
plotOne	projectedLearner-class
plotOne,projectedLearner-method	projectedLearner-class
plotXvalRDA	MLearn-new
plsda2	MLearn-new
plsdaI	MLearn-new
plspinDF	MLIntInternals
plspinHcube	plspinHcube
prcomp-class	clusteringOutput-class
prcompObj-class	clusteringOutput-class
precision	performance-analytics
precision,classifierOutput,character-method	performance-analytics
precision,classifierOutput,missing-method	performance-analytics
precision,classifierOutput,numeric-method	performance-analytics
precision,table,missing-method	performance-analytics
precision-methods	performance-analytics
Predict	RAB
Predict,daboostCont-method	RAB
Predict,raboostCont-method	RAB
predict.classifierOutput	predict.classifierOutput
predict.dlda2	MLIntInternals
predict.gbm2	MLIntInternals
predict.knn.cv2	MLIntInternals
predict.knn2	MLIntInternals
predict.lvq	MLIntInternals
predict.RAB	MLIntInternals
predictions	classifierOutput-class
predictions,classifierOutput-method	classifierOutput-class
predScore	classifierOutput-class
predScore,classifierOutput-method	classifierOutput-class
predScores	classifierOutput-class
predScores,classifierOutput-method	classifierOutput-class
probArray	MLIntInternals
probMat	MLIntInternals
projectedLearner-class	projectedLearner-class
projectLearnerToGrid	projectLearnerToGrid
qdaI	MLearn-new
qualScore	MLIntInternals
RAB	RAB
rab	MLearn-new
RAB4es	RAB
RABI	MLearn-new
raboostCont-class	raboostCont-class
randomForestI	MLearn-new
recall	performance-analytics
recall,classifierOutput,character-method	performance-analytics
recall,classifierOutput,missing-method	performance-analytics
recall,classifierOutput,numeric-method	performance-analytics
recall,table,missing-method	performance-analytics
recall-methods	performance-analytics
report	varImpStruct-class
report,varImpStruct-method	varImpStruct-class
RObject	classifierOutput-class
RObject,classifierOutput-method	classifierOutput-class
RObject,clusteringOutput-method	clusteringOutput-class
rpartI	MLearn-new
se2df	MLIntInternals
sensitivity	performance-analytics
sensitivity,classifierOutput,character-method	performance-analytics
sensitivity,classifierOutput,missing-method	performance-analytics
sensitivity,classifierOutput,numeric-method	performance-analytics
sensitivity,table,missing-method	performance-analytics
sensitivity-methods	performance-analytics
show,classifierOutput-method	classifierOutput-class
show,clusteringOutput-method	clusteringOutput-class
show,clusteringSchema-method	clusteringOutput-class
show,learnerSchema-method	learnerSchema-class
show,projectedLearner-method	projectedLearner-class
show,raboostCont-method	raboostCont-class
show,varImpStruct-method	varImpStruct-class
silhouette-class	clusteringOutput-class
silhouetteVec	MLIntInternals
sldaI	MLearn-new
SOMBout	MLIntInternals
somout	MLIntInternals
specificity	performance-analytics
specificity,table-method	performance-analytics
standardMLIConverter	MLearn-new
svm2	MLearn-new
svmI	MLearn-new
testPredictions	classifierOutput-class
testPredictions,classifierOutput-method	classifierOutput-class
testScores	classifierOutput-class
testScores,classifierOutput-method	classifierOutput-class
tn	performance-analytics
tn,table-method	performance-analytics
tonp	RAB
tp	performance-analytics
tp,table-method	performance-analytics
trainInd	classifierOutput-class
trainInd,classifierOutput-method	classifierOutput-class
trainPredictions	classifierOutput-class
trainPredictions,classifierOutput-method	classifierOutput-class
trainScores	classifierOutput-class
trainScores,classifierOutput-method	classifierOutput-class
varImpStruct-class	varImpStruct-class
x	MLIntInternals
xvalLoop	xvalLoop
xvalLoop,ANY-method	xvalLoop
xvalSpec	xvalSpec
xvalSpec-class	xvalSpec
