Making Enriched Heatmaps


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Documentation for package ‘EnrichedHeatmap’ version 1.39.0

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anno_enriched Annotation Function to Show the Enrichment
as.normalizedMatrix Convert a Normal Matrix to a normalizedMatrix Object
copyAttr Copy Attributes to Another Object
default_smooth_fun Default Smoothing function
discretize Discretize a Continuous Matrix to a Discrete Matrix
dist_by_closeness Distance by Closeness
EnrichedHeatmap Constructor Method for the Enriched Heatmap
enriched_score Enriched Scores
Extract.normalizedMatrix Subset normalized matrix by rows
extract_anno_enriched Extarct Enrichment Annotation Graphics as a Separated Plot
failed_rows Indices of Rows Failed from Smoothing
getSignalsFromList Get Signals from a List
makeWindows Split Regions into Windows
normalizeToMatrix Normalize Associations between Genomic Signals and Target Regions into a Matrix
print.normalizedMatrix Print the Normalized Matrix
rbind.normalizedMatrix Bind Matrix by Rows
[.normalizedMatrix Subset normalized matrix by rows