Analyze and correct probe positional bias in microarray data due to RNA degradation


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Documentation for package ‘AffyRNADegradation’ version 1.55.0

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AffyRNADegradation-package AffyRNADegradation: analyze and correct RNA degradation effects
afbatch Class AffyDegradationBatch
afbatch-method Class AffyDegradationBatch
AffyDegradationBatch Class AffyDegradationBatch
AffyDegradationBatch,ANY Class AffyDegradationBatch
AffyDegradationBatch-class Class AffyDegradationBatch
AffyRNADegradation AffyRNADegradation: analyze and correct RNA degradation effects
d Class AffyDegradationBatch
d-method Class AffyDegradationBatch
GetTongs Generate and visualize the tongs plot
PlotDegradationHooks Generate and visualize the tongs plot
plotDx Class AffyDegradationBatch
plotDx-method Class AffyDegradationBatch
PlotTongs Generate and visualize the tongs plot
RNADegradation Compute degradation parameters and correct probe intensities